PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041017-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 342aa    MW: 39321.1 Da    PI: 8.2182
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041017-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.2e-16453148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48
                     r+rWTteEd ll  +vkq+G++ W++++++m+  + R +k+c +rw +yl
   AUR62041017-RA  4 RQRWTTEEDALLSAYVKQYGPREWHLVSQRMNtlLDRDAKSCLERWKNYL 53
                     89**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MKERQRWTTE EDALLSAYVK QYGPREWHLV SQRMNTLLDR DAKSCLERWK NYLKPGIKKE  60
VPGRTAKRLG KWWKVYKEKQ ERTKKETSKC LEPIEEGKYD HILETFAEKL VKERTPPRQT  120
FLMATSNGLF LHSDHPSPPV PPPPPVTYTT TMLPPWLSTS NGVWLPSSPS VTLSLSSSIV  180
PTHPPTPVTW VPQEMGSHNI DNYPLTLGCL PSCAGAHPEQ MIMSELMDCC RELDEGHHAL  240
AAHKKEAAWR LNRVELQLES EKANRKREKM EEIEEKINAL KDEQKASIER IEAECREQLA  300
GLRRDAEAKE QKLAEQWVTK HTWITKLLDQ MGCRTRVTEP S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37630.11e-97MYB family protein