PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040582-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 387aa    MW: 41666.5 Da    PI: 5.9258
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040582-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-20164213255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  AUR62040582-RA 164 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAESAARAYDEAALRFRG 213
                     7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MCVSKVANQR EYEGFQSSGG GDEERANTVG SGEQVAAEAE APVFRTNWET SAMVMALTDV  60
VSGRGGYTTM RREDSKSGGA SGSGGGELGD IPLIYGETSS SASGVKEEMH TPSSMQQIQS  120
HSHSSSTMMS TTATLTSVEQ PPRTTTNTTP STYEEAQGGE RKRRYRGVRQ RPWGKWAAEI  180
RDPHKAARVW LGTFDTAESA ARAYDEAALR FRGNRAKLNF PEFVQSVPTP ARPTPATTAT  240
ISPAQAPAPE SYFPGSRMSQ TIHFQPPPQQ PQQSTIDVAR DYWEYSQLLQ SSGDFNFPGL  300
EHILYPSISR QLMGPPSLSF SSPPLSSLLS SSSYSQANFQ FPQNFTGDQT TIFRPPSQGG  360
SSDGTADNSG GYWSQPGPYH PPSSSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.18e-29ERF family protein