PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039675-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family M-type_MADS
Protein Properties Length: 72aa    MW: 8163.5 Da    PI: 10.3211
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039675-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.4e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+S+LCda+va+iifs++gkl+ey+s
  AUR62039675-RA  9 KRIENKINRQVTFSKRRIGLLKKAHEISILCDADVALIIFSTKGKLFEYAS 59
                    79***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 72 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRIGLLK KAHEISILCD ADVALIIFST KGKLFEYASD  60
AWDHEQYGLV S*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.12e-35MIKC_MADS family protein