PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62039523-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 643aa    MW: 70343.2 Da    PI: 4.7209
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62039523-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS408.47e-1252165571357
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAea++++++ la+alL+++  la+++  +m+++a+yf+eALa+r+++        l p    + n s+ l++   f+e++P+lkf+h
  AUR62039523-RA 216 LVHTLMACAEAIEQQNMGLAEALLKQIGFLAASQVGSMRKVATYFAEALARRVYK--------LCPDVPYDGNLSDMLQM--HFYETCPYLKFAH 300
                     689***************************************************9........33333333456666555..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea++g+++vH+iDf++++G+QWpaL+qaLa Rpegpp +R+Tg+g+p+++++++l+e+g++La+fA++++++fe++ +va++l+dle
  AUR62039523-RA 301 FTANQAILEAFSGKKKVHVIDFSMKEGMQWPALMQALALRPEGPPAFRLTGIGPPAPDNSDRLQEVGWKLAQFADSIQIQFEYRGFVANSLTDLE 395
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                        L+++p  E++aVn+v++lhrll+++++ e+    v+ l+k+++P +v+vveqea+hn++ Fl+rf e+l+yys+lfdsle+ +   ++++++
  AUR62039523-RA 396 SALLDLRPeTEVVAVNSVFELHRLLARPGAAEK----VMGLMKEVNPVIVTVVEQEANHNGSAFLDRFNESLHYYSTLFDSLESCV---DSQDKM 483
                     ********9********************9999....************************************************7...888899 PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
                     +++++lgr+i+nvvaceg +r+erhetl++Wr+r+++aGF pv+++++a kqa+ ll  ++ +dgy vee++gs
  AUR62039523-RA 484 MSEVYLGRQICNVVACEGVDRVERHETLAQWRNRFGTAGFAPVHIGSNAFKQASVLLDYFAgGDGYGVEENDGS 557
                     99999*****************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 643 aa     Download sequence    
MKRELPFTNP EPSTGGKPPV SGKSKMWEDQ NDAGVDELLA VLGYKVRSSD MAEVAQKLEQ  60
LEQAMGNVRE DGLSQLASET VHYNPSDLST WLESMLSEFN PSTTFDDDSS SQILLPSPIG  120
SVVDPIVNPT PQSSVRFSSD PYSDYDLKAI PGKAILTPPS PSSSREAKRL KASNYTAASA  180
TATATVSNPS SSKLTANSAV SRPVVVVDSQ ENGVRLVHTL MACAEAIEQQ NMGLAEALLK  240
QIGFLAASQV GSMRKVATYF AEALARRVYK LCPDVPYDGN LSDMLQMHFY ETCPYLKFAH  300
FTANQAILEA FSGKKKVHVI DFSMKEGMQW PALMQALALR PEGPPAFRLT GIGPPAPDNS  360
DRLQEVGWKL AQFADSIQIQ FEYRGFVANS LTDLESALLD LRPETEVVAV NSVFELHRLL  420
ARPGAAEKVM GLMKEVNPVI VTVVEQEANH NGSAFLDRFN ESLHYYSTLF DSLESCVDSQ  480
DKMMSEVYLG RQICNVVACE GVDRVERHET LAQWRNRFGT AGFAPVHIGS NAFKQASVLL  540
DYFAGGDGYG VEENDGSGDS YIPSTPGIQG FTSNVGNGRS ILASSSAWDH ERVPEFKPGI  600
HLNTTEAHLV NFFIHLDTKT WDSSKVWDWF IPSDVTLILS IE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.10.0GRAS family protein