PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038801-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 307aa    MW: 34428.7 Da    PI: 5.1171
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038801-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.12.1e-102302701055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR riN+++  L+ l+P+      +K++ +++Le+A +YIk Lq
  AUR62038801-RA 230 RKRRIRINERLRILQNLVPNG-----TKVDISTMLEEAFHYIKFLQ 270
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MGMFLDGEWE SICKLFTVDE FPDLAANFLD YFSPESKHDI DTLAYDVQSS ISHAEKKAVP  60
HVDILSCIDF SMLNGEFDAS LGLLFPNDTL TDTSTFDNVV NINTSVDMSS PNTELTLKRK  120
REVPVAPDDD KDKRSSLMET PKKNARISKT TQKAMRKTTK KTDEHPTPTV NTRKNNEIAD  180
SNSVDSNPCV SEEINETEDS TFNITESTTS TGKKRASRGA ATDPQSLYAR KRRIRINERL  240
RILQNLVPNG TKVDISTMLE EAFHYIKFLQ LQIRLLSSDD LWMYAPLAYN GLDVGAYGRM  300
PPFLGH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213233KKRASRGAATDPQSLYARKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.18e-38bHLH family protein