PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62038119-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 179aa    MW: 19788.6 Da    PI: 10.5019
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62038119-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.71.9e-1569118255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      y+GVr +   g+Wv+eIr+p   +k+ r++lg++ tae Aa+a++  + +l+g
  AUR62038119-RA  69 IYHGVRVRD-GGKWVCEIREP---NKKSRIWLGTYPTAELAARAHDVGAIALRG 118
                     69******9.9*********9...347*******************99999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MNSTPFSSQL QYSPLPSGGE SEDATSSDSP TNWSSASPFS YLLLNDEAVG FPKKRKAGRT  60
KFKETRHPIY HGVRVRDGGK WVCEIREPNK KSRIWLGTYP TAELAARAHD VGAIALRGDK  120
AVLDFLTRLG SLLELSLPRP RTLGSPPSKP LDPSFALFHQ LVVVKRLNSR WKDQQAVM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-37ERF family protein