PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62037488-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 447aa MW: 48949.2 Da PI: 6.0577

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62037488-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.5	4.9e-16	53	97	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W++I +++g +++ q++s+ qk+ AUR62037488-RA 53 RERWTEEEHNRFLEALKLYGRA-WRKIEEHVG-SKSAVQIRSHAQKF 97 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MLSSSSNMAA QEETSAAQSN SGNKNSPAAG VQSAVGEGQV PKIRKPYTIT KQRERWTEEE 60 HNRFLEALKL YGRAWRKIEE HVGSKSAVQI RSHAQKFFSK VVRETSNSNA SSIEPIEIPP 120 PRPKRKPSHP YPRKLVLPSR KDMPMEQGAR SVSPNSSLSE QDNQSPTSVL SAVASDMLAS 180 ADSAATKSNS PSPVSSGNFG NEVARLRSED SASQGEVHES KPGSVAPASV KLELFSDKES 240 SDKEESGSTK VLKLFGKDVV VSGNSESFTC LSKSPSSDMG EGVVQAYQED CKPDSSMRTI 300 GEAQDHVKFN SENSNAYQVE KPIPLPWWVF FKGMSVPPFV DPQEKENQRD GSSADSNSGS 360 VNEGENPDKN WEMETESGQC GSQSDKESKF IEDSCTPKEL ALIEKRCVDK GRKGFVPYKR 420 CLSERDMQSS TIPNEERESQ RIRLCL*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MLSSSSNMAA QEETSAAQSN SGNKNSPAAG VQSAVGEGQV PKIRKPYTIT KQRERWTEEE  60
HNRFLEALKL YGRAWRKIEE HVGSKSAVQI RSHAQKFFSK VVRETSNSNA SSIEPIEIPP  120
PRPKRKPSHP YPRKLVLPSR KDMPMEQGAR SVSPNSSLSE QDNQSPTSVL SAVASDMLAS  180
ADSAATKSNS PSPVSSGNFG NEVARLRSED SASQGEVHES KPGSVAPASV KLELFSDKES  240
SDKEESGSTK VLKLFGKDVV VSGNSESFTC LSKSPSSDMG EGVVQAYQED CKPDSSMRTI  300
GEAQDHVKFN SENSNAYQVE KPIPLPWWVF FKGMSVPPFV DPQEKENQRD GSSADSNSGS  360
VNEGENPDKN WEMETESGQC GSQSDKESKF IEDSCTPKEL ALIEKRCVDK GRKGFVPYKR  420
CLSERDMQSS TIPNEERESQ RIRLCL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	7e-37	MYB_related family protein