PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62036576-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 285aa    MW: 32963.3 Da    PI: 9.8252
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62036576-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.51e-17162260198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                     f+ +l+ps+v+k+  l++p+k a eh+ +  ++++++l+   +rsW v ++ +  ++r   ++l  +W +Fv +n+L++ D++vF+l+++     
  AUR62036576-RA 162 FQITLVPSHVTKLFKLTIPNKWALEHMVE--GTQKVRLQV-GNRSWIVGYRRSEIGNRyihHYLNPNWPNFVVDNNLEVDDVCVFELIQKgPLPV 253
                     8899**********************744..556788766.88*******77555555777**************************98644444 PP

                     .EEEEE- CS
              B3  92 lvvkvfr 98 
                     ++v +fr
  AUR62036576-RA 254 FNVYIFR 260
                     5666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MKFIRNSQTD GRSLSMIIEY KLVTLWCFVM LEIRRLKSLY SMGRIVAKGR ALTLRVTHLL  60
AHTNLLVRAL CTLTGLITTI VRKPIEIDEE DHEYDSATTV ETTDESENEY VSGSRKTPQL  120
VRVHISNRRD PTDEEKNIAV EKATRFMEAI ARQNKIQSAP MFQITLVPSH VTKLFKLTIP  180
NKWALEHMVE GTQKVRLQVG NRSWIVGYRR SEIGNRYIHH YLNPNWPNFV VDNNLEVDDV  240
CVFELIQKGP LPVFNVYIFR AIYNIVPLTK SCYMTKAKRK IELQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-13B3 family protein