PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62034991-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family bHLH
Protein Properties Length: 410aa    MW: 44174.6 Da    PI: 6.7578
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62034991-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.24e-10252300355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  AUR62034991-RA 252 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 300
                     58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    
MGDDGSSSQM GFHYNGEIIP NSPSSGMISR STTLSSIYGS NWDQMVSLGN QSGNYGASSM  60
VSSGELTKSS SYPLLIESQG VSSSHLGNYP ADPNLAHQML PKLPMFGGRN FPEIVGPFGL  120
HGGSQSHFPQ SYASNRRGID ENSSANVTQT ERGCQIADGR AVGVSPNGKR KRDSESPSPT  180
NETTDGDPQK DNSSDVSGQK GHDDQKKRNE PNAVANSSSP QAGKQVKDNS QSEEAPKQNY  240
IHVRARRGQA TNSHSLAERV RREKISERMR LLQELVPGCN KITGKAVMLD EIINYVQSLQ  300
QQVEFLSMKL STVNPELNFD IERLLTKDIL HSRGNESSAL GFNQGMGSAH PFSQGIHQSL  360
TAMPNSALQY HHMPQAVWDS DLQSLLHMGF DSNSAVGGLG PNGSSKTEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-82bHLH family protein