PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62034552-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | SRS | ||||||||
Protein Properties | Length: 163aa MW: 16857.6 Da PI: 5.6969 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 92.3 | 1e-28 | 16 | 87 | 83 | 154 |
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++ ++s l+ a+++ le+ ++P+ev+s+avfrcvrvs +dd +e++aYqtav+igGh+fkGiLydqG+e+ AUR62034552-RA 16 ENRSNSRVLTAANTTAGLEVGNFPPEVNSPAVFRCVRVSPIDDPDEQFAYQTAVNIGGHLFKGILYDQGPET 87 444455566778888999****************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MMRPSVGIGG EKRTRENRSN SRVLTAANTT AGLEVGNFPP EVNSPAVFRC VRVSPIDDPD 60 EQFAYQTAVN IGGHLFKGIL YDQGPETRYG SGGGGGESSS GGRSQQHGLM LTAATTTTDL 120 MGTVGSGSTN NNATTATATA SLLDPMGTNN SSIYPTPINA FLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 8e-30 | SRS family protein |