PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033872-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 311aa MW: 33421.4 Da PI: 6.169

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033872-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.2	6.7e-32	116	169	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ AUR62033872-RA 116 PRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 169 9****************************************************7 PP
2	Myb_DNA-binding	47.6	3.7e-15	117	168	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ +v+av++lGg+ t+k++ + m+ k +tl ++ks++q+y+ AUR62033872-RA 117 RMRWTTTLHAHFVHAVQLLGGHeraTPKSVLELMNvKDLTLAHVKSHLQMYR 168 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MNMDLSLQIS PPLITLTADD DSAVMKAVTF YSDRSSTTTE SGSSSAGSEM NCRGITDDNN 60 NISSSSVGLG LGNDQPILSL GFDHMNHFNG LSMSSFRGNS RMATTICGVK RGVRAPRMRW 120 TTTLHAHFVH AVQLLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KSTDKATLSS 180 SGLTLHEGDI MGSNQRSGMI DDQEEIIERG FSCEKADSNP SYSVNPSSPP PKTNLGSWLS 240 SLDAGNEAPL MNSLYSQTQV DGCNNGVKLS NMDQERLGPA ACFSSADHSL LNLEFTLGRP 300 SSNEINLLKC *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.1	2e-50	G2-like family protein