PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62033579-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HSF

Protein Properties

Length: 518aa MW: 57095.4 Da PI: 4.5798

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62033579-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	74.4	2e-23	101	186	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+y+++ed++l+ +isw ++g+sfv++d+ +fa+ vLp+ Fkh+nf+SF gF+kv+ ++ weF+++ F +++++ll++ AUR62033579-RA 101 FLSKTYDLVEDPNLDMIISWGSRGESFVIWDPVDFARLVLPRNFKHNNFSSF-------GFRKVDPDK---------WEFANEGFLRESRHLLKN 179 9************************************************9.......9*999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 i+r+ks+ AUR62033579-RA 180 IHRRKST 186 **987 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MDSDDKMFFP AIPISSSAPI PSGSSTTSSF DPSSVFSYSD PFYSTGFDSM TSSNINVNFQ 60 GFSSPPPPTI PSIPAVFASE SEVEKKPQPL ECLQGTPIPP FLSKTYDLVE DPNLDMIISW 120 GSRGESFVIW DPVDFARLVL PRNFKHNNFS SFGFRKVDPD KWEFANEGFL RESRHLLKNI 180 HRRKSTQSQQ LTSYGGSSSS ESGIGSEIEK LKKEKSALMQ EVVELQEQQR GTAEHVERVK 240 DKIQASEQRQ KQMVSFLAKV LQNPVFVDRL KQMKEQRSIV SPRTRRNFLK QAHQEAGSSG 300 TSLEGQIVKY KPEFEELRDF PSSDIPMTSA QDYLLQDVMG MSSSGALSLP FQSEVVTLNE 360 SATAQEFMDI PRSVGAGLSS AGLGDPFSRG KQVTTAHSEA ARDYFVSFPE ELIRQKTFPE 420 FSSAAIGNIK QEEVWSMGFD LSTDVSSSSP AFWGNVASYD IPDVGTSCPG EFSDVFDLAS 480 LQAGGTGIEN WLDDDSSPGH PENQGFESKD NIPRTNS*

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MDSDDKMFFP AIPISSSAPI PSGSSTTSSF DPSSVFSYSD PFYSTGFDSM TSSNINVNFQ  60
GFSSPPPPTI PSIPAVFASE SEVEKKPQPL ECLQGTPIPP FLSKTYDLVE DPNLDMIISW  120
GSRGESFVIW DPVDFARLVL PRNFKHNNFS SFGFRKVDPD KWEFANEGFL RESRHLLKNI  180
HRRKSTQSQQ LTSYGGSSSS ESGIGSEIEK LKKEKSALMQ EVVELQEQQR GTAEHVERVK  240
DKIQASEQRQ KQMVSFLAKV LQNPVFVDRL KQMKEQRSIV SPRTRRNFLK QAHQEAGSSG  300
TSLEGQIVKY KPEFEELRDF PSSDIPMTSA QDYLLQDVMG MSSSGALSLP FQSEVVTLNE  360
SATAQEFMDI PRSVGAGLSS AGLGDPFSRG KQVTTAHSEA ARDYFVSFPE ELIRQKTFPE  420
FSSAAIGNIK QEEVWSMGFD LSTDVSSSSP AFWGNVASYD IPDVGTSCPG EFSDVFDLAS  480
LQAGGTGIEN WLDDDSSPGH PENQGFESKD NIPRTNS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	9e-79	HSF family protein