PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033433-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 475aa    MW: 52519.7 Da    PI: 5.5018
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033433-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4026.2e-123964521374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                     lv++Ll+cA+a++ g+++la++l+ ++ +    + +++  + ++a yf  AL++rl +  ++l          + ++s+e   ++ f+e++P+lk
  AUR62033433-RA  96 LVHVLLTCADALQRGEFQLANSLIGEMTNGmmtRVNTACGIGKVAGYFIDALSRRLCH--PGLT--------GPGSVSNE-VLYHHFYEACPYLK 179
                     689*********************99987644445555689****************9..3333........22223333.56789********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     f+h+taNqaIlea+eg+ +vH+iDf++++GlQWpaL+qaLa Rp+gppslR+T++++++s+ ++  +etg rLa++A++++v+f+f+v+++++le
  AUR62033433-RA 180 FAHFTANQAILEAFEGQAHVHVIDFNLMHGLQWPALIQALALRPGGPPSLRLTAISPSTSNGHDFFHETGMRLAQLARSVNVKFSFRVVTTSQLE 274
                     *********************************************************9999********************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     d+++++++++p+Ea+aVn++lqlhrll     +++ ++++L+ +ksl+Pk+v+vveq+a+hn ++Fl rf+e+l+yysa+fdslea    + e++
  AUR62033433-RA 275 DIKPWMFQTSPEEAIAVNFILQLHRLL-----ITN-INQFLESIKSLNPKIVTVVEQDANHNVPDFLVRFTETLHYYSAMFDSLEAC---QLEAA 360
                     **************************9.....333.568*********************************************998...56888 PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + + + +++rei+n+++ceg++r+erhe l kW+ rl +aGFk+++++ +a kqa++ll+ ++++gy+v+e++g+l+lgW++rpL+++SaW+
  AUR62033433-RA 361 KPLAETYMQREICNIICCEGSARIERHEPLIKWQGRLIQAGFKALHMGRNAFKQANMLLSLCSGEGYSVQESDGCLTLGWHNRPLIAASAWQ 452
                     8899999************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    
MRSYDLYGVS HPVSDMDELI GYDRVTSWVN TFVPEHVSLP TTLGPGSGPG LSYIDPVPNE  60
LMKVIGDTWT DQIDEQQLSG ESQLVCDMEE DVGIRLVHVL LTCADALQRG EFQLANSLIG  120
EMTNGMMTRV NTACGIGKVA GYFIDALSRR LCHPGLTGPG SVSNEVLYHH FYEACPYLKF  180
AHFTANQAIL EAFEGQAHVH VIDFNLMHGL QWPALIQALA LRPGGPPSLR LTAISPSTSN  240
GHDFFHETGM RLAQLARSVN VKFSFRVVTT SQLEDIKPWM FQTSPEEAIA VNFILQLHRL  300
LITNINQFLE SIKSLNPKIV TVVEQDANHN VPDFLVRFTE TLHYYSAMFD SLEACQLEAA  360
KPLAETYMQR EICNIICCEG SARIERHEPL IKWQGRLIQA GFKALHMGRN AFKQANMLLS  420
LCSGEGYSVQ ESDGCLTLGW HNRPLIAASA WQVRTDKDGI SLTNDGSTSS SSSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-130GRAS family protein