PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62033367-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ARR-B
Protein Properties Length: 332aa    MW: 36678.1 Da    PI: 7.5641
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62033367-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.62.8e-08145194454
         G2-like   4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                       Wtp + + F+  v+ L G   A P ++l+ m+v+gLtl+ +   LQ Y 
  AUR62033367-RA 145 FTWTPYMENIFLGIVHGL-GVYDADPLEVLRRMHVPGLTLDVLIDKLQEYQ 194
                     57****************.9999**************************96 PP
2Response_reg28.48.3e-11179526103
                     EEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS-- CS
    Response_reg  26 vaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfd 103
                     v +a +g +ale+l++k+  +Dl+l+  ++p+m  +e+l  ++++  k+ ++++ +++++    e+++ Ga+ + +Kp d
  AUR62033367-RA  17 VVTACQGADALETLEKKKrkVDLVLMPTKLPDMCSFEVLDILQNKY-KMAVVMLFDTDQPCAKAEYVRNGAMFCYVKPLD 95 
                     778999999***99887778**********************9987.*******************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAGGGQSTNA SSSARLVVTA CQGADALETL EKKKRKVDLV LMPTKLPDMC SFEVLDILQN  60
KYKMAVVMLF DTDQPCAKAE YVRNGAMFCY VKPLDSRIAA TLWQHAFVKE VELFRQSRRS  120
PISGVTFNES EIHVAKRKFQ GSSSFTWTPY MENIFLGIVH GLGVYDADPL EVLRRMHVPG  180
LTLDVLIDKL QEYQVRQTFL DHSITVSPTP VCIIALNSRS QLMGQNNYTN PDQAFAHEQG  240
YPGFLQNPRQ DQLNRARAYE MPTPPLALVN SVPYLPHVPN MSQLPQASVP PANTAQRLIL  300
PPWPPTLTYL PSSSVAPPAP GHGEDESKLG G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13237KKKRKV
23363KKRKVDLVLMPTKLPDMCSFEVLDILQNKYK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31920.11e-13ARR-B family protein