PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62032564-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C2H2
Protein Properties Length: 354aa    MW: 39430.3 Da    PI: 10.405
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62032564-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.000177395123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+k F+++  L  H++ H
  AUR62032564-RA 73 FTCNFCKKDFPTSQALGGHQNAH 95
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MKDIVTMNQS EPKPSSFNPQ AVRLDLRLSN EGSSMRSRVE PNLSPNIIQN QLRPSSSPSK  60
PKNREKSSRS RVFTCNFCKK DFPTSQALGG HQNAHKQERA LAKRRKNGGL SQGADYSHYP  120
PPYYPYSGMQ NMPYYGSYYN RSPLGINPGS SMTQKPTGSM PSPQIGHAGW PKQSLRELMA  180
SYDRPMASHD RPMASYDRPP MAPLDRPMAS HDRPMASYDR PPMVPLDRPM ASHDRPMSSY  240
DRPPMASNDR SMASYDRPRM ENNSKIPFES INRTPISWFK ARNVDHAIPN LGPFKSNPTA  300
TSSVSRETTL LSNNNVTNGN ALPANESLLL LNEGGSNHHD KTKGSKIDLS LKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80730.11e-15C2H2 family protein