PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62032468-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 695aa MW: 79679.8 Da PI: 7.2917

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62032468-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.1	9e-21	78	171	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + +++k +r+r+++r+gC+a l+++k++ ++w+vt ++ +HnHel AUR62032468-RA 78 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNSPVKVANENKPQRNRKSSRCGCQAYLRISKTTelgISEWRVTGFVDHHNHELL 171 6************9998877356667999*************9******************9988889************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 695 aa Download sequence
MSVVSLLDLG CEKNILSHQE DIHPVVVYDD PSDQRSLSLD DISSADDLPN ETGLSLELTN 60 EVVPYIGQRF TSHDSAYEFY SEFAKRCGFS IRRHRTEGKD GVGKGLTRRY FVCHRAGNSP 120 VKVANENKPQ RNRKSSRCGC QAYLRISKTT ELGISEWRVT GFVDHHNHEL LEPNQVRFLP 180 AYRNISENDK SRIFMYAKTG ISVQQMMKLL ELEKCVEPGY LPFTEKDVRN LIQSFRKLDP 240 EEDSMDLLKM CSNIKEKDRS FRFEYTLDLN NNLENIAWSY ASSVEAYEMF GDAVVFDTTH 300 RLTAFDMPLG IWIGVNNYGM PCFFSCVLLR EENLSSLSWA LKVFLDFMNG KAPQTILTDQ 360 NMCLKEAVTA EMPTTKHALC IWLIVAKFPS WFNSVLGERY NEWKEEFYRL YNLESIDEFE 420 LGWRDMIYSF GLHSNRHIAN LFALRSLWAV SYLRSHFMAG LTNTGQSKSI NAFIQRFLSA 480 QTRLPHFVEQ VAVAVDFKDQ AGEQRTMQQN LQNINLKTGA PMEAHAASVL TPFAFTKLQE 540 QLVLAAHYAS FQIEDGFLVR HHTKLQGGRK VYWDLQLGII SCSCDLFKFS GILCRHALRV 600 LSTGNCFQIL ERYLPQRWRR FNSSAFKLQS TPTDHGEKVI RLQSMVSTLV SESSKSMERL 660 DLATEQVSIL LSRIKEQPIS TSFVSRDATV HRSF*

Sequence ? help Back to Top

Protein Sequence Length: 695 aa Download sequence

MSVVSLLDLG CEKNILSHQE DIHPVVVYDD PSDQRSLSLD DISSADDLPN ETGLSLELTN  60
EVVPYIGQRF TSHDSAYEFY SEFAKRCGFS IRRHRTEGKD GVGKGLTRRY FVCHRAGNSP  120
VKVANENKPQ RNRKSSRCGC QAYLRISKTT ELGISEWRVT GFVDHHNHEL LEPNQVRFLP  180
AYRNISENDK SRIFMYAKTG ISVQQMMKLL ELEKCVEPGY LPFTEKDVRN LIQSFRKLDP  240
EEDSMDLLKM CSNIKEKDRS FRFEYTLDLN NNLENIAWSY ASSVEAYEMF GDAVVFDTTH  300
RLTAFDMPLG IWIGVNNYGM PCFFSCVLLR EENLSSLSWA LKVFLDFMNG KAPQTILTDQ  360
NMCLKEAVTA EMPTTKHALC IWLIVAKFPS WFNSVLGERY NEWKEEFYRL YNLESIDEFE  420
LGWRDMIYSF GLHSNRHIAN LFALRSLWAV SYLRSHFMAG LTNTGQSKSI NAFIQRFLSA  480
QTRLPHFVEQ VAVAVDFKDQ AGEQRTMQQN LQNINLKTGA PMEAHAASVL TPFAFTKLQE  540
QLVLAAHYAS FQIEDGFLVR HHTKLQGGRK VYWDLQLGII SCSCDLFKFS GILCRHALRV  600
LSTGNCFQIL ERYLPQRWRR FNSSAFKLQS TPTDHGEKVI RLQSMVSTLV SESSKSMERL  660
DLATEQVSIL LSRIKEQPIS TSFVSRDATV HRSF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein