PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031911-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 273aa    MW: 29805 Da    PI: 4.9198
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031911-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.77.1e-105997240
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                     ++WT+eE+ l++ + ++lG+g+W+ Iar     Rt+ q+
   AUR62031911-RA 59 KPWTEEEHRLFLIGLQKLGKGDWRGIARSYVVSRTPTQV 97
                     58***************************9999999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MKKSASMGNL SLFHSNSSAA ASPNNNNANS ASDDHGYLSD DPNHASCSSN RRSERKKGKP  60
WTEEEHRLFL IGLQKLGKGD WRGIARSYVV SRTPTQVTEE PETVPEEQLL PPPPEPRETD  120
NATLLPSLDL SLSTEPEPME ATSTEEVKAN NETQSLPNNL TPSVPAFYVP IPYPPFWTQP  180
TIHPEEDKNG ENSQQHQVLK PTPVLRKEPV NVDELVGLSQ LNLSETEKSH VVPPQLSLNL  240
LSAPSRQSAF HASVPVSSLD LTEGKNSVIQ AV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16350.14e-28MYB_related family protein