PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031484-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 396aa    MW: 43812.7 Da    PI: 4.6461
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031484-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.3e-19130179255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp +   r r +lg+++taeeAa  +++a+ kl+g
  AUR62031484-RA 130 KFRGVRQRP-WGKWAAEIRDPAK---RVRLWLGTYDTAEEAAMVYDNAAIKLRG 179
                     89*******.**********843...6*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MDYSHLLCPV KYTEHRSVTK KQNLIKVSKK SIPKPPPRVV RVSVVDNDAT DSSSDEESDL  60
FGRHRVRRYT NEIVIEQTTS LNNAAVATTT PPIVAPLCKK AGSRRKSSAN TAVATGQPGG  120
SLVTSGGVRK FRGVRQRPWG KWAAEIRDPA KRVRLWLGTY DTAEEAAMVY DNAAIKLRGP  180
DALTNFATPP PREPPAPVVV ETHAPSTSGG YESGDESASH NILCSPTSVL HFRGGSTGEE  240
LSRFKPDIIK HEDELLFCPV QEPSNSLMXX XXXXXXXXXX CPLEECQGES SSNIGDFLDT  300
PYLNDFFNFE SPEPMIFEDS KPLDNLFTIG DDCDNQFHNQ FDFGDVFVDS FMDDFDFSTM  360
NNNNNNSYSS SNLLQVDDYF QDINEIFAAD PLVAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-45ERF family protein