PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62031116-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 187aa    MW: 20848.6 Da    PI: 10.5112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62031116-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-1992142255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd + ng  +r +lg+f taeeAa a+++a+ k++g
  AUR62031116-RA  92 HYRGVRQRP-WGKYAAEIRDSTRNG--ARLWLGTFVTAEEAALAYDRAAFKMRG 142
                     7********.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MPETELPLNE NDSHDMVLYQ VLNEANNTMN NLYQQQYHPQ RMMMMKNQNV AKRNMTSSTP  60
TTKFYAPISG GVAKRHYRGF YAPISGGVAK RHYRGVRQRP WGKYAAEIRD STRNGARLWL  120
GTFVTAEEAA LAYDRAAFKM RGVKALLNFH AHIGKPVSGD FVGLINNNHP SLVASTSSSS  180
SQQGLK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-28ERF family protein