PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62030763-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 300aa    MW: 33554.3 Da    PI: 7.1285
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62030763-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.9e-1873136255
             AP2   2 gykGVrwdkkrgrWvAeIrdpse.......ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                      ++GVr++  +g+WvAeIr+p +       n+   kr +r +lg+f ta eAa a+++a+k+++g
  AUR62030763-RA  73 TFRGVRQRT-WGKWVAEIREPINsmttgygNNkqsKRsRRLWLGTFSTAMEAALAYDEAAKAMYG 136
                     69****999.**********766699777655887558************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MESQLSERTY MNARRRRNGY NSVAEIIQKW KIQNQQLGST IEELKKSTRK GPARGSRKGC  60
MPGKGGPENL GCTFRGVRQR TWGKWVAEIR EPINSMTTGY GNNKQSKRSR RLWLGTFSTA  120
MEAALAYDEA AKAMYGPSAI LNFPLQNKEH EDRVLYSSDM QPTASESTEG SEHYKGFNEE  180
LKSPCVSQAT DGGGTKEESA MGSTHSSNGS YLNLGFDYTH DWVMEPLDVF GGNFGLKQED  240
DYEFGQQGLF YSDFLFQHSK SSDVMPNYKI QQPLSGPLGI DFINSSDFLR PNTNLDSLH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.12e-29ERF family protein