PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62030532-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 290aa MW: 31994.4 Da PI: 6.3711 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.8 | 6.2e-19 | 63 | 126 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..........kr.krfslgkfgtaeeAakaaiaarkkleg 55 ++GVr++ +g+WvAeIr+p +n+ kr kr +lg+f ta eAa a+++a+k+++g AUR62030532-RA 63 TFRGVRQRT-WGKWVAEIREPINNKstgygnnqqsKRsKRLWLGTFSTAVEAALAYDEAAKAMYG 126 69****999.**********656334445556887558************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MNARRRRNGY NSVAEIIEKW KIQNQHFGST VVELKKSTRK GPARGSRKGC MPGKGGPENL 60 GCTFRGVRQR TWGKWVAEIR EPINNKSTGY GNNQQSKRSK RLWLGTFSTA VEAALAYDEA 120 AKAMYGPSAI LNFPLQSEEH EDQVLYGSNM QSTASESTEG SEHYKGFNEE LKSPCVSQVT 180 DGGGAKEESA MGSNSSDGSY LNLGFDYTHD WVMEPLDGFG GGNYGLKQED EYEFGQQGLF 240 FSDFLFQQSK SSDVMPSYKI QQPLSGPLGI DFISSSDFLR PNTNIDGLH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38340.1 | 2e-30 | ERF family protein |