PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62029031-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 319aa MW: 35405.2 Da PI: 6.4324 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.5 | 8.3e-10 | 5 | 33 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +++WT eE+e l +v+++G+g Wk+I + AUR62029031-RA 5 KQKWTSEEEEALRAGVAKHGPGKWKLIQK 33 79*************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MGNPKQKWTS EEEEALRAGV AKHGPGKWKL IQKDDKWRNM SAAVQGSRDK LRPPKPKPVQ 60 DAPAAPSVPM QAPAAPSVPV QAPTVHVPVV HESPADHVKD DFGKDLPDAK KRSQFLFSAM 120 DDQTQITIAL TLNCGSRDWQ ELGYNEMIFE ALEEQNGMDI GSILAHIEKR SDVPVPQNFR 180 KQLGARLRRL CSQDKLEKVD SHFRLKNNSL ETNASGQKGI WARQHPPIVY SKAGESVEEA 240 AKTAAYKVVE AEYTSSIAAE AVKDLEKFLK LAEETDSVLQ MAKEIFERCK VLVVNSSLLH 300 DMSEWDLHIE PISATVLE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17520.1 | 6e-36 | MYB_related family protein |