PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62028373-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 262aa    MW: 29345.8 Da    PI: 3.9342
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62028373-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.56.9e-135398755
             AP2  7 rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    r+++ +grW+A+I  +     +k+ +lg++ t eeAa a++ a+ +++g
  AUR62028373-RA 53 RRHHHNGRWEARIGRVLG---NKYLYLGTYATQEEAAIAYDIAAIQYRG 98
                    89999*******988422...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
AYDDESTAAR AYDLAALKYW GKDTILNFSL STYENEMKEM DGLSREEYLG SLRRHHHNGR  60
WEARIGRVLG NKYLYLGTYA TQEEAAIAYD IAAIQYRGLN AVTNFDLSRY INLDKPNISC  120
DDDQDQPISP NNNNEVEPSN CKLVDDSSGS TCSSNQSLLE YTSSIEKITH DQVDDAISID  180
ELLWSDHQQP TVDCSSTLLG FNEYDDLLQY NVTNDNLYSC VDGHQGGGSI DDVGNNEKDF  240
FSDLSSLLCD FDVMEAEQIE T*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.24e-47AP2 family protein