PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62027582-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family WRKY
Protein Properties Length: 355aa    MW: 38938 Da    PI: 5.851
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62027582-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.63e-29178231255
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYege 55 
                     +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers ++p++v++tYe++
  AUR62027582-RA 178 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQNCSVKKRVERSFQEPSTVITTYEES 231
                     8**************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSNEDHQSIL DNTNFFSFFD NPSNFNTSCV DNNNNPSCND GNYYSFNEFL HGSSMDYPTL  60
AKSVGLSPSS SEVFSSVVDE NPVMTKEKEA AAAIVVGNGG SNNNPSTPNS SISSSSTEAG  120
GADDGSVGKK DDKQHPNKAV DDQDELKQGT NKGKKKGGKK ERDPRFAFMT KSEIDNLEDG  180
YRWRKYGQKA VKNSPYPRSY YRCTTQNCSV KKRVERSFQE PSTVITTYEE SDDLQELVTP  240
PPHLVHPYAR KITKADLMAL EQHHKLTWPD HLKRSNETVS KVTVALISAK SNATDDMRSN  300
PEPIMDVVGL GAQFEIPQRL FRGWEVPGGG CVVAASGVDG CVYVLANHAV ELSF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.12e-38WRKY family protein