PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027390-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 169aa MW: 19591.2 Da PI: 7.7394 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 112 | 6.7e-35 | 10 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeelvv++L+++ + + + +vi+++d+y ++Pw+L+ k+ +e ++wy++s++ +nr+t+sgyWk g d++++s+ AUR62027390-RA 10 LPPGFRFCPTDEELVVHFLRRRDALLPYHP-DVIPDLDVYPYNPWELEGKAFSEGSKWYYYSRK--------MQNRVTESGYWKPMGMDEPIMSS 95 79************************9888.99**************977778899*****987........469*******************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ vg+kk vf+ g+ p + t+W+mheyrl AUR62027390-RA 96 ssSRKIVGMKKYYVFHIGEPPADVWTSWIMHEYRL 130 767778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MADDNHGDSL PPGFRFCPTD EELVVHFLRR RDALLPYHPD VIPDLDVYPY NPWELEGKAF 60 SEGSKWYYYS RKMQNRVTES GYWKPMGMDE PIMSSSSSRK IVGMKKYYVF HIGEPPADVW 120 TSWIMHEYRL PDSGSTSKSG SRKRGQSKLV SRLLLYMYIK QTHDAVDI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 2e-54 | NAC family protein |