PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62027152-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 25666.3 Da PI: 8.4601 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.3 | 1.3e-48 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 pGfrFhPt+eel+++yLk+ v+g+k++ ++i ++iy+++PwdLp +k e+ewyfF++rd+k+++g r+nr+t++g+Wkatg+d++++s AUR62027152-RA 12 PGFRFHPTEEELLDFYLKNMVNGRKMHH-DIIGFLNIYRFDPWDLPGLAKIAEREWYFFVPRDRKHSNGGRPNRTTEHGFWKATGSDRKIVSLse 105 9************************999.99***************8778899*************************************99765 PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++gl+ktLvfy+grap+g+ktdW+m+eyrl AUR62027152-RA 106 PKRVIGLRKTLVFYQGRAPRGTKTDWIMNEYRL 138 6778***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MDDKTSPNFE LPGFRFHPTE EELLDFYLKN MVNGRKMHHD IIGFLNIYRF DPWDLPGLAK 60 IAEREWYFFV PRDRKHSNGG RPNRTTEHGF WKATGSDRKI VSLSEPKRVI GLRKTLVFYQ 120 GRAPRGTKTD WIMNEYRLPD NYVLPKKEDQ TTFVENNCKV AAAAVTPTPN TIQLPFGKEN 180 LELQVPKSGM DWGQDPFCSL SCSPWLENLL NFSSPSLISQ IL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-83 | NAC family protein |