PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62025998-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | MYB_related | ||||||||
Protein Properties | Length: 720aa MW: 79374.2 Da PI: 6.0753 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.1 | 6.3e-11 | 655 | 709 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 + rWT+eE+e l+++v+ + g Wk I ++ kgRt+ ++k++w++ AUR62025998-RA 655 KVRWTAEEEETLKKGVAIYDQGngrtiPWKNILEYGDsvfrKGRTAVDLKDKWRN 709 679*****************99*************99*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 720 aa Download sequence |
MEEEDSASTL AWSWVIEALA KSQLVDASLL YELVSKTPPL LGESGRKARE ATALRCLEGL 60 FSPSNVSCEN HVASDWSKCG FDPAESCEAA IQRLLRETSG FKGASDELNC NTDSFVKHKK 120 ASLPKSTLEL LKDMIVEDTR PLAASLKEVS GLAVGDQCVL DIPFDGGDPT SPPLRSDEDD 180 HADKTMLAEE NGCSPISGID NQLRQAYLAN GKTSSRGGIS SHHTDNHVQE LEAASHDMDN 240 LCPPGKKLKL DKKYGIQSKH QHSAPVDSNQ MCNNAEDGQY HEVIKVNAKH DGKSYGKDDE 300 QSKTYAENHD QQQISPNDGN AEAEQYHEVI KVNAPHDGKS YGIDDEQPKT SVENHDQQKI 360 SPNNGDHFRK EVDLAMKNHN FPSSQCVLTG DSLELTEAQT NLCMKCNKDG QLLSCSASSC 420 PLLFHESCLG CSASFDDLGN FYCPFCAYSR AMSEYVRAKE RVSLARKELS LFIGGRTRDL 480 PERDGDSSSG NDVNLGKHKN VDKTAEVKKG ATFVNQAAKS HQTSWKGKQL ELTHSSAYMN 540 VNGFVMATQQ HISFQDRQGA EIIIQLSRDP SQIWNKEQDD HHCDVVKLSG DNNELKTRGK 600 LTRCKITEFH EDASSESISD SDGPLQDKRN DGTCSLACPR PLRAIPGSPV GRRKKVRWTA 660 EEEETLKKGV AIYDQGNGRT IPWKNILEYG DSVFRKGRTA VDLKDKWRNI TRGTSPKVK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72740.1 | 2e-08 | MYB_related family protein |