PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62025580-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

NAC

Protein Properties

Length: 343aa MW: 39460.3 Da PI: 5.8416

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62025580-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.3	1.5e-36	16	151	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrF+P+deel+++yL +k++g+ l+ + ++e+ +y v P+dL ++e+ wyfF++ ++ y++g+r++r++ +gyWkatg d ++ + AUR62025580-RA 16 PPGFRFEPKDEELITHYLVPKINGEALPP-NKMHETVLYGVlAPQDLTlYYEPESENTWYFFTRLERLYENGSRPRRSAGNGYWKATGVDATIRN 109 9***********************999.56888877765599434445677********************************** PP NAM 95 kkgelvglkktLvfy........kgrapkgektdWvmheyrl 128 k+g +g kk L+f+ ++++pkg kt W+mhe+rl AUR62025580-RA 110 KQGVIIGHKKALAFFikiepppiNKNEPKGIKTPWLMHEFRL 151 ***********9998888889*************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MASSSNETVN FWNMIPPGFR FEPKDEELIT HYLVPKINGE ALPPNKMHET VLYGVLAPQD 60 LTLYYEPESE NTWYFFTRLE RLYENGSRPR RSAGNGYWKA TGVDATIRNK QGVIIGHKKA 120 LAFFIKIEPP PINKNEPKGI KTPWLMHEFR LANTSEPKPK RRKTNDHNAA HSNTTSHSEG 180 SKPKNMLDGW VLCKVYKLGR DVAVDEAPII PVAQEEHDQV VVHSQEEHNQ VVHVQEVHNH 240 QVVHAQEEDN QVVHVPVSPN KLNYTKEDIL RHLELDEDVL HHPQPTDDPL LNSFNMDMSF 300 QPELLHVEEH DMSFQPENPI QMPLPHYSEN FEFILNNISF DS*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MASSSNETVN FWNMIPPGFR FEPKDEELIT HYLVPKINGE ALPPNKMHET VLYGVLAPQD  60
LTLYYEPESE NTWYFFTRLE RLYENGSRPR RSAGNGYWKA TGVDATIRNK QGVIIGHKKA  120
LAFFIKIEPP PINKNEPKGI KTPWLMHEFR LANTSEPKPK RRKTNDHNAA HSNTTSHSEG  180
SKPKNMLDGW VLCKVYKLGR DVAVDEAPII PVAQEEHDQV VVHSQEEHNQ VVHVQEVHNH  240
QVVHAQEEDN QVVHVPVSPN KLNYTKEDIL RHLELDEDVL HHPQPTDDPL LNSFNMDMSF  300
QPELLHVEEH DMSFQPENPI QMPLPHYSEN FEFILNNISF DS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.1	1e-37	NAC family protein