PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024965-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HD-ZIP
Protein Properties Length: 821aa    MW: 89586.3 Da    PI: 6.1055
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024965-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox50.82.8e-161668957
                    HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  9 keqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    +eq+++Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  AUR62024965-RA 16 TEQVDALERVYAECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 68
                    58*************************************************97 PP
2START158.74.5e-501493532204
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+ +sg a+ra+g+v  +++   +e+l+d++ W +++++ e+      g  g+++l+
  AUR62024965-RA 149 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISHRCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRSLEVFTMFPAGngGTIELI 242
                     7899******************************************************.7777777777***********999999999****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksg 188
                     +++ +a+++l+p Rdf+++Ry+ +l+ g+ v++++S++   +++  ++++Ra +lpSg+li+p+++g+s +++v+h +l++++++++lr+l++s+
  AUR62024965-RA 243 YTQIYAPTTLAPaRDFWTLRYTTTLENGSVVVCERSLSGSGPNTAAPQFIRADMLPSGYLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYQSS 337
                     ******************************************999************************************************** PP

                     HHHHHHHHHHHTXXXX CS
           START 189 laegaktwvatlqrqc 204
                      + ++k++ a+l++ +
  AUR62024965-RA 338 KVVAQKMTIAALRYIR 353
                     ***********99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MAMVVHRESS SGSGGTEQVD ALERVYAECP KPSSLRRQQL IRECPILSNI EPKQIKVWFQ  60
NRRCREKQRK ESSRLQTVNR KLSAMNKLLM EENDRLQKQV SQLVCENGFM RQQLHTAPTA  120
TTDGSCESVV TTPQHNLRDT NNPAGLLSIA EETLAEFLSK ATGTAVDWVQ MPGMKPGPDS  180
VGIFAISHRC SGVAARACGL VSLEPTKIAE ILKDRPSWFR DCRSLEVFTM FPAGNGGTIE  240
LIYTQIYAPT TLAPARDFWT LRYTTTLENG SVVVCERSLS GSGPNTAAPQ FIRADMLPSG  300
YLIRPCDGGG SIIHIVDHLN LEAWSVPEVL RPLYQSSKVV AQKMTIAALR YIRQIAQETS  360
GEVVYSLGRQ PAVLRTFSQR LSRGFNDAIN GFPDDGWTLL TCDGAEDVII ACNSAKTFMA  420
TLNAASSLPM VGGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADFSVDAY SAAALKSNAY  480
AFPGMRATRF TGSQIIMPLG HTIENEEMLE VIRLEGHSLT PEDAYISRDI HLLQICSGID  540
ENAVGACSEL VFAPIDEMFP DDAPLLPSGF RIIPLDSKPE TATNRTLDLT SSLEVGPSTN  600
NGAADATSSG STRSVLTIAF QFPFEISLQE NVATMARQYV RTVISSVQRV AMAISPSGAS  660
PTVGPKLSPG SPEALTLAHW ICQSYSYHMG TELLRTSSAG DDTVLKHLWH HQDAIVCCSL  720
KSLPVLIFAN QAGLDMLETT LVALQDVTLD KIFDESGRKS LCSDFPKIMQ LGYACLPGGV  780
CTSTMGRNVS YEQAIAWKVF AADETTVHCL AFTFVNWSFV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein