PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62024642-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

WRKY

Protein Properties

Length: 425aa MW: 48027 Da PI: 9.9372

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62024642-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.1	1e-29	128	186	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC++ gC++kk+ver++ed ++++itY++ Hnh+ AUR62024642-RA 128 SDSWSWRKYGQKPIKGSPYPRGYYRCSTIkGCSAKKQVERCKEDASILVITYTSAHNHP 186 69**********************9877**************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MDLSSPNPAP STPALIVASI PSPTHTCKVH RKIHAACTRG LKIGPGSSLI RLIRPVKACI 60 NAAKLITDTR ACRMFGLVFR KREKTRDFGG EIEANDKRKL EDDEKIVVKV KIEAKKGDAQ 120 QKNNGPPSDS WSWRKYGQKP IKGSPYPRGY YRCSTIKGCS AKKQVERCKE DASILVITYT 180 SAHNHPSSHY QNTPKKKAQD KAQAHVSEAH SSPKNEKPSN KKNNVEINPC DEGHQVLRFQ 240 YSGKDTDIVV QDVDKVNLVD LIIEYWEIAE REQTTMTKHP EFTYIHKMKH VELKNDMALM 300 KMFVDLPGRD LIYIWVGELQ KSTPIVEIAQ SLKGSRRMNA TESSDHIQPQ PTLDQSNEPR 360 LTKKQEIETL KQAEVTFDMA PPRSPININE LIVDNMEYWN NIEIAARAPT QKQKKAQSKK 420 KNAM*

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MDLSSPNPAP STPALIVASI PSPTHTCKVH RKIHAACTRG LKIGPGSSLI RLIRPVKACI  60
NAAKLITDTR ACRMFGLVFR KREKTRDFGG EIEANDKRKL EDDEKIVVKV KIEAKKGDAQ  120
QKNNGPPSDS WSWRKYGQKP IKGSPYPRGY YRCSTIKGCS AKKQVERCKE DASILVITYT  180
SAHNHPSSHY QNTPKKKAQD KAQAHVSEAH SSPKNEKPSN KKNNVEINPC DEGHQVLRFQ  240
YSGKDTDIVV QDVDKVNLVD LIIEYWEIAE REQTTMTKHP EFTYIHKMKH VELKNDMALM  300
KMFVDLPGRD LIYIWVGELQ KSTPIVEIAQ SLKGSRRMNA TESSDHIQPQ PTLDQSNEPR  360
LTKKQEIETL KQAEVTFDMA PPRSPININE LIVDNMEYWN NIEIAARAPT QKQKKAQSKK  420
KNAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	9e-32	WRKY family protein