PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62024462-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family HSF
Protein Properties Length: 253aa    MW: 29078.7 Da    PI: 8.6977
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62024462-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind105.93.2e-33231142102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl k+y +++d+e+++++sw+e g++fvv+++ efa+++Lp++Fkh nf+SFvRQLn+YgF+kv +++         weF ++ F++gkkel+ +
  AUR62024462-RA  23 FLLKTYMLVDDPETDTVVSWNEGGTAFVVWQPAEFARDLLPTFFKHCNFSSFVRQLNTYGFRKVATSR---------WEFCNDMFQRGKKELIGQ 108
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  AUR62024462-RA 109 IRRRKA 114
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MEGVCEKGLF EYGIIRKSNP PPFLLKTYML VDDPETDTVV SWNEGGTAFV VWQPAEFARD  60
LLPTFFKHCN FSSFVRQLNT YGFRKVATSR WEFCNDMFQR GKKELIGQIR RRKAWAHRPQ  120
PPTVAANPTN SEAPPNKHDE DQRSSSTSSS SELNILVDEN KRLKKENGVL SSELTNMKNK  180
CKELLDLVAV YTNRKEDQSQ GSNSNNDDDE NYEKQPKLFG VRLQVQSEKE RKRKRSEEVY  240
ETARLLLSQS CK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41690.18e-68HSF family protein