PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62024074-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | LBD | ||||||||
Protein Properties | Length: 174aa MW: 19162 Da PI: 6.5012 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 31.4 | 5.4e-10 | 3 | 56 | 47 | 99 |
DUF260 47 kal.peeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 ++l ++e+r++a++slv+eA +r++dPv G +g ++k+ +l++ +++++++ + AUR62024074-RA 3 RNLhNDEDRKRAADSLVWEALCRQKDPVFGPYGEYRKIYDELKSYQNQAHAQVH 56 55524567**************************************99987655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MVRNLHNDED RKRAADSLVW EALCRQKDPV FGPYGEYRKI YDELKSYQNQ AHAQVHHQTG 60 QFVAQNGHTN GSVYKTENGL IGWSVNTNGS AGINKVNYNG GIHENVGLVD CIRAQCGPVI 120 GSSIYGNCGS QDDLHGAENL RQDMDVNVGS VVPQQQHLLN GFNHGQHYYL PGE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06280.1 | 2e-18 | LBD family protein |