PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62023864-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 428aa MW: 48799.4 Da PI: 8.0166

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62023864-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	90	3.3e-28	60	147	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++ k r+raetr+gC+a++ v+k+++gkw++tk+++eH+H+l+p AUR62023864-RA 60 FYNTYATHVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDKRE--KVVRQRAETRVGCRAMILVRKMNSGKWVITKCVKEHTHPLTP 147 ****************************************9988..999**********************************986 PP
2	FAR1	81	2.1e-25	266	354	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+ +g+i r+f C+keg+ + + k + r++ra+tr gCka++ vk++k gkw+vt+++ +HnH+l+ AUR62023864-RA 266 FYDEYARKVGFVMRVMSCRRSEVDGRILARRFGCNKEGYCLSIRGKLGQVRKPRASTRGGCKAMILVKLDKLGKWVVTRFVRDHNHPLV 354 9*************************************9999999**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
TEGRVGDEND MGGSSVEGGQ SQDDKMNEEL SEKEVIPVGE PINEPFVGQE FESEAAAHAF 60 YNTYATHVGF VIRVSKLSRS RRDGTAIGRA LVCNKEGYRM PDKREKVVRQ RAETRVGCRA 120 MILVRKMNSG KWVITKCVKE HTHPLTPGKG RKDLIFEQYP NEHDKIRELS QQLAVEKKRA 180 ATYKTHLEMV FEHIEEHNQS LSKKIQDIVG SVREFESREK ENLESDEEAG EFENSARESL 240 DIGVGDGVVE PYEGMEFDSE EAAKVFYDEY ARKVGFVMRV MSCRRSEVDG RILARRFGCN 300 KEGYCLSIRG KLGQVRKPRA STRGGCKAMI LVKLDKLGKW VVTRFVRDHN HPLVVSAREA 360 RKKMDDKDKK IQELTAELRN EKRLCTLYQE QLFAFMKDVE DHNAQISKKV QAVLINLKEI 420 ENQEPKP*

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

TEGRVGDEND MGGSSVEGGQ SQDDKMNEEL SEKEVIPVGE PINEPFVGQE FESEAAAHAF  60
YNTYATHVGF VIRVSKLSRS RRDGTAIGRA LVCNKEGYRM PDKREKVVRQ RAETRVGCRA  120
MILVRKMNSG KWVITKCVKE HTHPLTPGKG RKDLIFEQYP NEHDKIRELS QQLAVEKKRA  180
ATYKTHLEMV FEHIEEHNQS LSKKIQDIVG SVREFESREK ENLESDEEAG EFENSARESL  240
DIGVGDGVVE PYEGMEFDSE EAAKVFYDEY ARKVGFVMRV MSCRRSEVDG RILARRFGCN  300
KEGYCLSIRG KLGQVRKPRA STRGGCKAMI LVKLDKLGKW VVTRFVRDHN HPLVVSAREA  360
RKKMDDKDKK IQELTAELRN EKRLCTLYQE QLFAFMKDVE DHNAQISKKV QAVLINLKEI  420
ENQEPKP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	2e-99	FAR1 family protein