PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62023642-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 162aa    MW: 17957.1 Da    PI: 4.2537
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62023642-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.61.7e-142441055
             AP2 10 kkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  AUR62023642-RA  2 RSWGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 44
                    57**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MRSWGSWVSE IRAPNQKTRI WLGSYSTPEA AARAYDAALL CLKGSSANLN FPHSAYSTTS  60
PLIPSHAAAT TATSSSPPPS DQLIDDIISL ADDPYHPTFD DINNAASSMV MMNNDYPWFD  120
LFPKHLDPVM MNSMFFNPPS MNMMDIEQLY DDGDIPLWSF R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-23ERF family protein