PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62023448-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 137aa MW: 15036.3 Da PI: 10.1876 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.1 | 5.1e-19 | 31 | 81 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr ++ +g+Wv+eIr+p++ ++r++lg+f +e+Aa+a++ a+ +l+g AUR62023448-RA 31 PVYRGVRKRR-WGKWVSEIREPRK---KTRIWLGSFPIPEMAARAYDVAAHCLKG 81 68*****887.**********843...6************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence |
MEQPQCSAEF DDPATSPDSP SKPQGTGTRH PVYRGVRKRR WGKWVSEIRE PRKKTRIWLG 60 SFPIPEMAAR AYDVAAHCLK GCKAQLNFPE EIDFLPRPTS CAPRDIQAAA AKAANAVVEV 120 KVSGCAPSRR KVHGLL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01250.1 | 3e-48 | ERF family protein |