PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62022183-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GATA
Protein Properties Length: 243aa    MW: 26089.9 Da    PI: 6.1179
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62022183-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.72.8e-17186220135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C + kTp+WR gp g+ktLCnaCG++y++ +l
  AUR62022183-RA 186 CLHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 220
                     99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MEAPDFFVED LLDLSNGGDE MMTDAFFDTV TGNSTDSSTL TPASDSCNSS VSCAPSFPDS  60
YFSGADLCVP YDDMAELEWL SNFVEESFST DDLHKLQFIP TNPQQPGPAR QGGPNPPTTV  120
PGKARSKRSR VAPCDWSTRL LMVSSPSPAT SSSDSGPSTG AKKQPSMTKR RESGGPDTGP  180
GEVRRCLHCA AEKTPQWRTG PMGPKTLCNA CGVRYKSGRL VPEYRPAASP TFVSAKHSNS  240
HRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-61GATA family protein