PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021113-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 268aa    MW: 29419.5 Da    PI: 9.0057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021113-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.1e-1266110147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
   AUR62021113-RA  66 RESWTEPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 110
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MVSMNPSLPE GFYLDANGVA LPGLNPFSAP PPEESPATAA TATVSSPTDD SSSKKIRKPY  60
TITKSRESWT EPEHDKFLEA LQLFDRDWKK IEAFIGSKTV IQIRSHAQKY FLKVQKSGSN  120
EHLPPPRPKR KAAHPYPQKA PKIGELKPPV PPIANNCSSS TESTAMAHNT GGPNEAVKHA  180
PPLRVLPDFA QVYGFIGSVF DPEVSGHMQR LKKMDPIDVE TVLLLMRNLS INLRSPDFED  240
HRRLLSSYDI DSDKGIPGGM RDVVCGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01520.19e-72MYB_related family protein