PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62021049-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 404aa    MW: 44279.1 Da    PI: 4.7517
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62021049-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2621.3e-19134183255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdp +   r r +lg+++taeeAa  +++a+ kl+g
  AUR62021049-RA 134 KFRGVRQRP-WGKWAAEIRDPAK---RVRLWLGTYDTAEEAAMVYDNAAIKLRG 183
                     89*******.**********843...6*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MDYSHLLCPV KYTEHRSVTK KQNLIKVSKK SIPKPPPRVV RVSVVDNDAT DSSSDEESDL  60
FGRHRVRRYT NEILIEQTTS LSNAAVAATT ATTTAPIVAP LCKKGGSRRK SSANTAVPTG  120
QPGGALVTSG GVRKFRGVRQ RPWGKWAAEI RDPAKRVRLW LGTYDTAEEA AMVYDNAAIK  180
LRGPDALTNF ATPPPREPPA PVVVETHAPS TSGGYESGDE SASHNILCSP TSVLHFRGGS  240
TGEEVSRFKP DIVKNENEML FCPVQETSNS VSNSLMSISN SMSNSSSSCH LEECQGESSS  300
NIGDFLDTPY LNDFFNFESP EPMIFEDSKP LDNLFAIGDD CDNQFHNQFD FGDVFVDSFM  360
DDFDFNTMNN NNNNSYSSSN LLQVDDYFRD INEIFAADPL VAL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-42ERF family protein