PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020926-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 94aa    MW: 10566.8 Da    PI: 4.3516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020926-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.42.5e-111444131
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                     +g+WT+eEd +lv +++++G+g+W++++   
   AUR62020926-RA 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNT 44
                     79*************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MGRPPCCDKD GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGVKVHE NMDYIDDDDG  60
NNPPLTFLEK WLLDESTTSR QVAQEILRLP SIF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.19e-29MYB family protein