PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62020826-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 435aa    MW: 48265.1 Da    PI: 7.5248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62020826-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.91.4e-19250300256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  AUR62020826-RA 250 LYRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYMLRGE 300
                     59******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    
MEDHCSELET FMQQRKMPSH FPVEDVSKSF NNTHLWGASF HDHNNGSDDG RIEFRSLPFF  60
DRLTSTRLSE PSSSTSGYMI PEHNNKTTTT VTQQGSALDF TFPRASTFVN FFKSSAPADK  120
LTQSRLPQTS SEPSHSVSAA HINLSDLTLF SKEAKIMEPY LSRVETVGSS SQDAVLSDPL  180
LQCGQSQYLP AGHNRWLRMS EDLSSKVVST EFRLSPTKTQ AMKKSSGRRL QALLHPHKST  240
SSSTTTSGKL YRGVRQRHWG KWVAEIRLPR NRTRVWLGTF DTAEEAAFAY DTAAYMLRGE  300
YAHLNFPDQK HLLKVNSLNG ATAALLEAKI QAISQQGGLK KSVDLLPASS LLMNNLADPD  360
SISSSRPLSV RKEWQFELDG RVVGTSEMID GNKLMRSSEA SCDHSVDAHG VQLSKMPSLD  420
MDSIWDALLI SDTT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.19e-44ERF family protein