PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62020352-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 26526.5 Da PI: 7.5721 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.1 | 5.8e-20 | 35 | 84 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrd ++ ++r++lg+f++ae+Aa+a+++a+++l+g AUR62020352-RA 35 KFRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDKAARQLRG 84 89*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MRRGRSTAKT TPTQNGSTPL DPTPPAMGIN GSNVKFRGVR KRPWGRFAAE IRDPWKKTRV 60 WLGTFDSAED AARAYDKAAR QLRGPKAKTN FPPSSSNHHH QNDAVLNHPS PFYRNDAVLV 120 DPYHHGTDGG GGCSDAEMIQ RPASSGMSST VESYSASQAI RIRHAPPVKA RVVHAPAAED 180 CRSDCDSSSS VIDDVDGDIA SSSAAVGFNS EVVLKQPLPF DLNLPPPEID GCFLGFEDFP 240 TTALCL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20310.1 | 1e-26 | ERF family protein |