PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62020229-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 654aa MW: 71519.9 Da PI: 7.7121

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62020229-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.4e-09	354	391	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + AUR62020229-RA 354 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 391 554459******************************88 PP
2	BELL	120.3	8.6e-39	211	282	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakLl++l+eV++rY+qy+ q+q+v+ssFe++ag+gsak+YtslAlk+iS++FrcLkdai++qi AUR62020229-RA 211 QRQELQMKKAKLLNMLDEVEQRYRQYNSQIQVVVSSFEQAAGIGSAKLYTSLALKTISKQFRCLKDAIMSQI 282 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 654 aa Download sequence
MMATYFHGGP EIQAAAAGDH NLQTLYLMNP NFITTAYSEG QTPPNMLFLN PANSLSQGNL 60 PHAPPPQQQQ FIGIPLSCSS GPHPSQDHGR PSPTSSGSQH QIPAALHGLS VSRVHPNLWS 120 PAANPGSNQP GPDMADQMGF RRPMAAQHQG LSLSLSPGQQ QQNQGQQVTV AGVGGSSAAS 180 NGVIIGSKYL KPAQELLEEV KAAAAEISTA QRQELQMKKA KLLNMLDEVE QRYRQYNSQI 240 QVVVSSFEQA AGIGSAKLYT SLALKTISKQ FRCLKDAIMS QIKATSKSLG EEERNSNALG 300 VKLEGGAGSR LRFVDHQLRQ QRALQQLGMM QHNAWRPQRG LPERAVSVLR AWLFEHFLHP 360 YPKDSDKHML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YLEEVKTQEQ NSGNSEDNTT 420 NANKNGKSSK NDDHTTSKET GAGQQHEQQD HGGAVIQPHQ QQADHTTNDM ISNLSAMSAT 480 SSQGFTLIGS SSDMESLMAR SPKKQRSNSD IQNSPSSILS MDMEMKPVDH HQRHSFLMAN 540 HGDAAAPTGF NPYLVNDMTG RFNPDQMTAH PYHGNAVSLT LGLPHCESLS LGNHQQNFLP 600 NQLGRRLDIG TGEADFCGIS MAQPSHPNNG YESIDIQNRK RFAAHQLLHD FVA*

Sequence ? help Back to Top

Protein Sequence Length: 654 aa Download sequence

MMATYFHGGP EIQAAAAGDH NLQTLYLMNP NFITTAYSEG QTPPNMLFLN PANSLSQGNL  60
PHAPPPQQQQ FIGIPLSCSS GPHPSQDHGR PSPTSSGSQH QIPAALHGLS VSRVHPNLWS  120
PAANPGSNQP GPDMADQMGF RRPMAAQHQG LSLSLSPGQQ QQNQGQQVTV AGVGGSSAAS  180
NGVIIGSKYL KPAQELLEEV KAAAAEISTA QRQELQMKKA KLLNMLDEVE QRYRQYNSQI  240
QVVVSSFEQA AGIGSAKLYT SLALKTISKQ FRCLKDAIMS QIKATSKSLG EEERNSNALG  300
VKLEGGAGSR LRFVDHQLRQ QRALQQLGMM QHNAWRPQRG LPERAVSVLR AWLFEHFLHP  360
YPKDSDKHML AKQTGLTRSQ VSNWFINARV RLWKPMVEEM YLEEVKTQEQ NSGNSEDNTT  420
NANKNGKSSK NDDHTTSKET GAGQQHEQQD HGGAVIQPHQ QQADHTTNDM ISNLSAMSAT  480
SSQGFTLIGS SSDMESLMAR SPKKQRSNSD IQNSPSSILS MDMEMKPVDH HQRHSFLMAN  540
HGDAAAPTGF NPYLVNDMTG RFNPDQMTAH PYHGNAVSLT LGLPHCESLS LGNHQQNFLP  600
NQLGRRLDIG TGEADFCGIS MAQPSHPNNG YESIDIQNRK RFAAHQLLHD FVA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-106	TALE family protein