PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019985-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 346aa    MW: 37344.3 Da    PI: 6.7501
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019985-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.79.9e-1294138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + ++lG+g+W+ I+r     Rt+ q+ s+ qky
   AUR62019985-RA  94 PWTEEEHRMFLLGLQKLGKGDWRGISRSYVISRTPTQVASHAQKY 138
                      8****************************989************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSLHQNG VVGNTSPAAG  60
DLTPDHVPPS ADGYASEDFV PGSSSSRERK KGVPWTEEEH RMFLLGLQKL GKGDWRGISR  120
SYVISRTPTQ VASHAQKYFI RQCNVSRRKR RSSLFDIVAD EEGDTPMAAH DFLPEHPSDT  180
QTQNNNHPLP PAPILDEVCE SMASSNSTSN EAEPDLPKQE GVEPSQSSSI STDTPPNYYP  240
VVYPTYVSPF YPYPVPYWTG GNPEPTKETH EVVKPTAVHS KSPINVDELV GMSKLSLGET  300
IGSGEPSSLS LKLLDGSSRQ SAFHANPTPG SPDMNSSGGS PIHAV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.11e-115MYB_related family protein