PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62019921-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 183aa MW: 20914.2 Da PI: 5.3582 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 47.8 | 2.5e-15 | 1 | 39 | 18 | 56 |
HHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 18 lFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +F +++ p ++++++A++lgL rqV++WFqNrRa+ k AUR62019921-RA 1 MFSSESRPGSKTKQQIADQLGLHPRQVSIWFQNRRARSK 39 599999*******************************99 PP | |||||||
2 | HD-ZIP_I/II | 91.8 | 7.8e-30 | 2 | 77 | 18 | 93 |
HD-ZIP_I/II 18 FeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 F++e++ ++ K+++a +Lgl+prqv +WFqnrRAR k+kq+E+dy+ Lk++yd+l+++ e L+ke+++L+ e+k+ AUR62019921-RA 2 FSSESRPGSKTKQQIADQLGLHPRQVSIWFQNRRARSKSKQTERDYSILKACYDNLASKFEVLKKENQSLTIEIKR 77 7778888899************************************************************999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MFSSESRPGS KTKQQIADQL GLHPRQVSIW FQNRRARSKS KQTERDYSIL KACYDNLASK 60 FEVLKKENQS LTIEIKRLRN LKEGPKDCTS DLAPVTCSSN GESISLSSPE KHKAQPEDYI 120 QDSILSKDKS EGFMSFEQET DSQFNMIESA DDSLASFRNH DGLESAYLME HNCISDWWDF 180 WT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 34 | 42 | RRARSKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61890.1 | 3e-38 | HD-ZIP family protein |