PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019727-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

TALE

Protein Properties

Length: 389aa MW: 43469.1 Da PI: 6.8753

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019727-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.1	3.5e-09	127	164	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + AUR62019727-RA 127 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 164 664459******************************88 PP
2	BELL	83.5	2.6e-27	1	58	15	72
BELL 15 lleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +le++d+ Yk y+eq++ v+ssFeavag g+a Y +lA++a+SrhFrcL+d i+ qi AUR62019727-RA 1 MLEKLDRGYKNYCEQMKGVVSSFEAVAGAGAADTYSALASRAMSRHFRCLRDTIVAQI 58 99******************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MLEKLDRGYK NYCEQMKGVV SSFEAVAGAG AADTYSALAS RAMSRHFRCL RDTIVAQIKE 60 TKKAMGEKDN ATVLGTTRGE TPRLRLLDQN LRQQRAYQQM TLMEAHPWRP QRGLPERSVS 120 ILRAWLFEHF LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EQMYLEETKE 180 EQDKNMGSSS DGGTEHQPST TDHLGGLIHH QQPPQEQKPD PDQLIRIDPD SLSSIVNTTT 240 TASSSRGDTQ NRMSQLNFQQ NGQFIGRVEG FGSVDHFDFP SSSSYNQQHH AANYGSTSQN 300 DNNTPHQGFG GGNNVSLTLG LQQHGGNGVS LAFSPASQAA ASLFYPREHN MEDCQPVNHQ 360 YSLLDENQGQ NNLPYRNLMG AQVLHDFA*

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MLEKLDRGYK NYCEQMKGVV SSFEAVAGAG AADTYSALAS RAMSRHFRCL RDTIVAQIKE  60
TKKAMGEKDN ATVLGTTRGE TPRLRLLDQN LRQQRAYQQM TLMEAHPWRP QRGLPERSVS  120
ILRAWLFEHF LHPYPSDVDK HILARQTGLS RSQVSNWFIN ARVRLWKPMV EQMYLEETKE  180
EQDKNMGSSS DGGTEHQPST TDHLGGLIHH QQPPQEQKPD PDQLIRIDPD SLSSIVNTTT  240
TASSSRGDTQ NRMSQLNFQQ NGQFIGRVEG FGSVDHFDFP SSSSYNQQHH AANYGSTSQN  300
DNNTPHQGFG GGNNVSLTLG LQQHGGNGVS LAFSPASQAA ASLFYPREHN MEDCQPVNHQ  360
YSLLDENQGQ NNLPYRNLMG AQVLHDFA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41410.1	1e-107	TALE family protein