PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019621-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 428aa MW: 47581.4 Da PI: 7.9672

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019621-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.2	3.9e-18	178	222	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+W +eEde+l ++v+q+G+ +W++ a++++ gR+++ +k++w+ AUR62019621-RA 178 RGNWRPEEDEKLRKLVEQYGPQNWNSLAEKLQ-GRSDNAVKNHWHV 222 89****************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLSMAATGEN GKSNEEHDQI ARSTKKPKRK IIHQNSGGSQ GFNDDVMEVE NLHQGANSKA 60 MENSPNGVFK PAELPKSQPS FRDLLKGYAR DAQRTQKAGE MVKEGSGFQG GGSRFSILDN 120 HDNMEIENNG SDLREIVNLD DPLQAGLGDK FANFDIGNID KMEDDTDNEM KSSSSCPRGN 180 WRPEEDEKLR KLVEQYGPQN WNSLAEKLQG RSDNAVKNHW HVIMARMQRE RSKQQSNKRS 240 SLISSSSVLS TTSSTHDFLS KTWKSQNNYG TLKNNDHGHG LYKFEQYSND ERKLRNYRAS 300 SSSASMTQPQ CLLGNWRGIN NNSTSSSIFE HSNGFNTRFS CGHSSTLLDG SQCGIGFGSS 360 SYGVNYCADH KGIHSSYAPF PGQSKMMTTT TTAMRRPSLL ERLEKEEEQA SNKKEVKFID 420 FLGVGNT*

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLSMAATGEN GKSNEEHDQI ARSTKKPKRK IIHQNSGGSQ GFNDDVMEVE NLHQGANSKA  60
MENSPNGVFK PAELPKSQPS FRDLLKGYAR DAQRTQKAGE MVKEGSGFQG GGSRFSILDN  120
HDNMEIENNG SDLREIVNLD DPLQAGLGDK FANFDIGNID KMEDDTDNEM KSSSSCPRGN  180
WRPEEDEKLR KLVEQYGPQN WNSLAEKLQG RSDNAVKNHW HVIMARMQRE RSKQQSNKRS  240
SLISSSSVLS TTSSTHDFLS KTWKSQNNYG TLKNNDHGHG LYKFEQYSND ERKLRNYRAS  300
SSSASMTQPQ CLLGNWRGIN NNSTSSSIFE HSNGFNTRFS CGHSSTLLDG SQCGIGFGSS  360
SYGVNYCADH KGIHSSYAPF PGQSKMMTTT TTAMRRPSLL ERLEKEEEQA SNKKEVKFID  420
FLGVGNT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17950.1	6e-19	MYB family protein