PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019553-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

G2-like

Protein Properties

Length: 428aa MW: 46944.6 Da PI: 5.9597

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019553-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	77.7	1.5e-24	195	244	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k++++WtpeLH+rFv+aveqL G +kA+P++ilelm++++Lt+++++SHLQ AUR62019553-RA 195 KTKVDWTPELHRRFVQAVEQL-GVDKAVPSRILELMGIDCLTRHNIASHLQ 244 6799***************.**************************7 PP
2	Myb_DNA-binding	33.7	8.6e-11	198	244	2	45
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++q AUR62019553-RA 198 VDWTPELHRRFVQAVEQLGVDkaVPSRILELMGiDCLTRHNIASHLQ 244 57******************************8889999**98 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MLAISPLRSN KDGNNKGGTM EANFSMGTDD FPDFSGTNLL DSIDFDELFM GMHDGDVLPD 60 LEMDPELLAD FSISTGEDES SEFNNSSSAM SVENIISPND DGNIASFEAS YEGNYGNNDV 120 SEVLETSMEV MEKDHDGRGL RTSEKEGIEG KKDVKSESTT TTISSSKESN NMKKSSSSSS 180 KSGVNNNNNH QGKRKTKVDW TPELHRRFVQ AVEQLGVDKA VPSRILELMG IDCLTRHNIA 240 SHLQCMHDSQ KYRSHRKHLL AREAEAASWT QKRQMYGVAM GGAGKGGANI SPWYPPTMGF 300 PPMTTTMHSP FRPLHVWGHP TMNPQARLHL WPKQVAPSTT PLPPTWAPPP HPPPPADPSF 360 WHSAHQRSKE SIDSAIGDVL AKPWLPLPIG LKPPSMDSVM VELQRQGIPK IPPSCASNIA 420 TPYFLVQ*

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MLAISPLRSN KDGNNKGGTM EANFSMGTDD FPDFSGTNLL DSIDFDELFM GMHDGDVLPD  60
LEMDPELLAD FSISTGEDES SEFNNSSSAM SVENIISPND DGNIASFEAS YEGNYGNNDV  120
SEVLETSMEV MEKDHDGRGL RTSEKEGIEG KKDVKSESTT TTISSSKESN NMKKSSSSSS  180
KSGVNNNNNH QGKRKTKVDW TPELHRRFVQ AVEQLGVDKA VPSRILELMG IDCLTRHNIA  240
SHLQCMHDSQ KYRSHRKHLL AREAEAASWT QKRQMYGVAM GGAGKGGANI SPWYPPTMGF  300
PPMTTTMHSP FRPLHVWGHP TMNPQARLHL WPKQVAPSTT PLPPTWAPPP HPPPPADPSF  360
WHSAHQRSKE SIDSAIGDVL AKPWLPLPIG LKPPSMDSVM VELQRQGIPK IPPSCASNIA  420
TPYFLVQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	4e-52	G2-like family protein