PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62019471-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 201aa    MW: 21735.2 Da    PI: 9.1217
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62019471-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2636.5e-203585256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr ++ +gr++AeIrdp +   ++r++lg+f taeeAa+a+++a+++++g+
  AUR62019471-RA 35 KYRGVRKRP-WGRYAAEIRDPLK---KTRVWLGTFNTAEEAARAYDNAAREFRGA 85
                    8********.**********743...5*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MAPKQINSNN NAPHNPTPSS AAYSAVVVTP QTEIKYRGVR KRPWGRYAAE IRDPLKKTRV  60
WLGTFNTAEE AARAYDNAAR EFRGAKARTN FTYFDQQCLS ANGDNNSLTT VESGGACVDA  120
HPPHLGISLS GADSGGPYVM YGMLAKRVSD IREAFRCGRV LGSNDGTQNQ SEISAVVSGD  180
GRQRMVFDLD LNLAPPREVV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53170.12e-34ERF family protein