PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62019415-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | Nin-like | ||||||||
Protein Properties | Length: 239aa MW: 28039 Da PI: 5.2901 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.2 | 1.2e-26 | 128 | 177 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i e+++kyF+lpi +AAkeL+v+lTvLK++CR+++IkRWPhRkiksl AUR62019415-RA 128 ESIGYEEIRKYFDLPISKAAKELNVGLTVLKKRCRELNIKRWPHRKIKSL 177 67999*******************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MPQFDTEFQD YLLDYPFTNN ESLNNLEYLG DDFQLWDECP PLCEEDAWKP LSQLPPLVPS 60 LASIIENSNQ PRFNDTQFVL TASVYDNQTL DTMQKQGNKL VKNENIIVGE DSCDQNDEIR 120 KNKMTKIESI GYEEIRKYFD LPISKAAKEL NVGLTVLKKR CRELNIKRWP HRKIKSLEAL 180 INSVKEQGMV KMVERLEEDK RKLQFMAEFE LTEETKRLRQ QCFKANYKKR RALALNYV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 3e-37 | Nin-like family protein |