PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62019092-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 591aa MW: 62355.4 Da PI: 8.7683

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62019092-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.4	1e-10	175	220	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwq 45 r++W++eEd+ l+ av+++G g+W+tI + +R + q+ rw+ AUR62019092-RA 175 RKPWSEEEDLELITAVQKFGEGSWATILKGEFkGNRNATQLAQRWN 220 789**********************98655579*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MVDATEIKLK KVAVTEEDVC TLLQRYSATT VLSLLREVAQ FPEVKIDWQA LVEKTKTGIK 60 TAREYQMLWR HLAYRKPLIE NVDPEDPPSD DDSDLEYELE ARPPVSNEVA TEALNCVKVL 120 ASGSANQSSI PNSSSVEGRA LNINSSHVSS EFPQASGNFG EGLDANGLPI NRKRRKPWSE 180 EEDLELITAV QKFGEGSWAT ILKGEFKGNR NATQLAQRWN IIRKKQGILN IGGTKIASPQ 240 PTEAQLATRR ALDMAFKDKL STGCSTVGNA PAGTTSPKIS VSKTDLPITG ASVPSSQPQS 300 SPVTDLTSSV PKARPQKKVG QPSVGTDSIQ ATAVAAGARI VSPSAAASMF KAVQSKKALH 360 IRGGDSLIKT SAVGCSSPLP PNVHFIRTGL SSTPTFTASA GTASCVAGQQ AKSNGAIKPP 420 VPPAAVSQLP KARTPSAVGM ELTTAAQQME NRTSTAVNVQ GSDTKLTRVQ EDNASPPQCL 480 PDSSLDKCRA TSTGADVGLS KCMVSIGSSQ SANVARNEVK DDACKKIFES SALKSDNEKL 540 SAVQNLQSGI SGVKGTPEVP PSRIVDEGAE KMEVSKEVSV SVKISNQTNL *

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MVDATEIKLK KVAVTEEDVC TLLQRYSATT VLSLLREVAQ FPEVKIDWQA LVEKTKTGIK  60
TAREYQMLWR HLAYRKPLIE NVDPEDPPSD DDSDLEYELE ARPPVSNEVA TEALNCVKVL  120
ASGSANQSSI PNSSSVEGRA LNINSSHVSS EFPQASGNFG EGLDANGLPI NRKRRKPWSE  180
EEDLELITAV QKFGEGSWAT ILKGEFKGNR NATQLAQRWN IIRKKQGILN IGGTKIASPQ  240
PTEAQLATRR ALDMAFKDKL STGCSTVGNA PAGTTSPKIS VSKTDLPITG ASVPSSQPQS  300
SPVTDLTSSV PKARPQKKVG QPSVGTDSIQ ATAVAAGARI VSPSAAASMF KAVQSKKALH  360
IRGGDSLIKT SAVGCSSPLP PNVHFIRTGL SSTPTFTASA GTASCVAGQQ AKSNGAIKPP  420
VPPAAVSQLP KARTPSAVGM ELTTAAQQME NRTSTAVNVQ GSDTKLTRVQ EDNASPPQCL  480
PDSSLDKCRA TSTGADVGLS KCMVSIGSSQ SANVARNEVK DDACKKIFES SALKSDNEKL  540
SAVQNLQSGI SGVKGTPEVP PSRIVDEGAE KMEVSKEVSV SVKISNQTNL *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	1e-53	MYB_related family protein